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Number of items at this level: 201.


Aadil , KR and Nathani , A and Sharma , CS and Lenka, N and Gupta P, P (2019) Investigation of poly(vinyl) alcohol-gellan gum based nanofiber as scaffolds for tissue engineering applications. Journal of Drug Delivery Science and Technology (54). p. 101276.

Adebayo , A.S. and Suryavanshi , M.A. and Bhute , S. and Agunloye , A.M. and Isokpehi , R.D. and Anumudu , C.L. and Shouche , Y.S. (2017) The microbiome in urogenital schistosomiasis and induced bladderpathologies. PLoS Negl Trop Dis. , 11 (11). e0006067.

Adebayo , A.S. and Suryavanshi , M.V. and Bhute , S. and Agunloye , A.M. and Isokpehi , R.D. and Anumudu , C. and Shouche , Y.S. (2017) The microbiome in urogenital schistosomiasis and induced bladder pathologies. PLoS Negl Trop Dis., 11 (8). e0005826..

Agarwal , D. and Dhotre, D. and Patil , R. and Shouche , Y. and Juvekar , S. and Salvi , S. (2017) Potential ofHealth and Demographic Surveillance System in Asthma and Chronic ObstructivePulmonary Disease Microbiome Research. Front Public Health. , 5. p. 196.

Ahanger , S.H. and Günther , K. and Weth, O. and Bartkuhn , M. and Bhonde , R.R. and Shouche , Y.S. and Renkawitz , R. (2014) Ectopically tethered CP190 induces large-scale chromatin decondensation. Scientific Report, 4 (3917). pp. 1-10. ISSN 4 : 3917

Ahanger , SH and Srinivasan , A and Vasanthi , D and Schouche, Y.S. and Mishra, R.K. (2013) Conserved boundary elements from the Hox complex of mosquito, Anopheles gambiae. Nucleic Acids Research, 41 (2). pp. 804-816. ISSN 2013, Vol. 41, No. 2

Ahanger , S.H and Shouche , Y.S. and Mishra, R.K (2013) Functional sub-division of the Drosophila genome via chromatin looping The emerging importance of CP190. Nucleus , 4 (2). pp. 115-122.

Aher , MN and Erande , ND and Kumar, VA and Fernandes M, M and Gonnade, RG (2020) Influence of fluorine substitution on the molecular conformation of 3'-deoxy-3'-fluoro-5-methyluridine. Acta Crystallographica Section C: Structural Chemistry . , 76 (4). pp. 346-352. ISSN 2020 Apr 1;76(Pt 4):346-352.

Alai, S and Ghattargi , VC and Gautam, M and Patel, K and Pawar, SP and Dhotre, DP and Shaligram , U and Gairola , S (2020) Comparative genomics of whole-cell pertussis vaccine strains fromIndia. BMC Genomics. 2020 May 7;21(1):345. , 21 (1). p. 345.

Antony , P.C and Kumaresan , D and Hunger , S and Drake, H.L and Murrell , J and Shouche , Y.S. (2013) Microbiology of Lonar Lake and other soda lakes. The ISME Journal , 7. pp. 468-476.

Atre , A.N. and Mehta , A. and Chandorkar , P.R. and Patole , M.S. and Diwanay, S.S. and Shah , S.R. and Modak , M.S. (2016) Uptake of clinical yeast isolates by human epithelial cell line Internalisation d’isolats cliniques de levures par des cellules épithéliales humaines. Journal of Medical Mycology , 26 (3). pp. 187-192.


Bagade , A and Nandre , V and Paul , D and Patil , Y and Sharma , N and Giri , A and Kodam , K (2020) Characterisation of hyper tolerant Bacillus firmus L-148 for arsenic oxidation. Environmental Pollution (261). p. 114124.

Bagchi , S.N. and Dubey , N. and Singh , P. (2017) Phylogenetically distant clade of Nostoc-like taxa with the description of Aliinostoc gen. nov. and Aliinostoc morphoplasticum sp. nov. Int J Syst Evol Microbiol, 67 (9). pp. 3329-3339.

Banskar, S. and Bhute, S.S. and Suryavanshi , M.V. and Punekar, S. and Shouche, Y.S. (2016) Microbiome analysis reveals the abundance of bacterial pathogens in Rousettus leschenaultii guano. Scientific Report, 15 (6). p. 36948.

Banskar S, S. and Mourya DT, D.N. and Shouche YS, Y.S. (2016) Bacterial diversity indicates dietary overlap among bats of different feeding habits. Microbiol Res., 182. pp. 99-108.

Bhat , S. and Jagadeeshaprasad , M.G. and Patil , Y.R. and Shaikh , M.L. and Regin, B.S. and Mohan , V. and Giri , A.P. and Balasubramanyam , M3. and Boppana , R. and Kulkarni , M.J. (2016) Proteomic Insight Reveals Elevated Levels of Albumin in Circulating Immune Complexes in Diabetic Plasma. Mol Cell Proteomics., 15 (6). pp. 2011-2020.

Bhute , S and Pande, P. and Shetty , S.A. and Shelar , R. and Mane, S. and Kumbhare, S.V. and Gawali , A. and Makhani , H. and Navandar, M. and Dhotre , D. and Lubree, H. and Agarwal, D. and Patil, R. and Ozarkar , S. and Ghaskadbi, S. and Yajn , C. (2016) MolecularCharacterizationandMeta-AnalysisofGutMicrobialCommunitiesIllustrateEnrichmentofPrevotellaandMegasphaerainIndianSubjects. Frontiers in Microbiology : Microbial Symbioses (7). e660.

Bhute , S.S. and Suryavanshi , M.V. and Joshi , S.M. and Yajnik , C.S. and Shouche , Y.S. and Ghaskadbi , S.S. (2017) Gut Microbial Diversity Assessment of Indian Type-2-Diabetics Reveals Alterations in Eubacteria, Archaea, and Eukaryotes. Front Microbiol. , 14 (8). p. 214.

Bhute , S.S. and Suryavanshi , M.V. and Joshi , S.M. and Yajnik , C.S. and Shouche , Y.S. and Ghaskadbi , S.S. (2017) Gut Microbial Diversity Assessment of Indian Type-2-Diabetics Reveals Alterations in Eubacteria, Archaea, and Eukaryotes. Front. Microbiol..

Biju , S.D. and Senevirathne , G. and Garg , S. and Mahony, S. and Kamei , R.G. and Thomas, A. and Shouche, Y. and Raxworthy , C. and Meegaskumbura , M. and Van Bocxlaer , I. (2016) Frankixalus, a New Rhacophorid Genus of Tree Hole Breeding Frogs with Oophagous Tadpoles. PLoS One. , 11 (1). e0145727.

Bussas , V. and Sharma , A. and Shouche , Y. (2017) IP and the Budapest Treaty - Deposit Biological material for patent purposes. In: ‘Microbial Resources: From Functional Existence in Nature to Applications’. Ipek Kurtböke . Academic Press 2017. ISBN ISBN: 9780128047651


Chandel , K. and Parikh, R.Y. and Mendki, M.J. and Shouche, Y.S. and Veer, V. (2015) Isolation andcharacterization of Vagococcus sp from midgut of Culex quinquefasciatus (Say)mosquito. J Vector Borne Dis. , 52 (1). pp. 52-57.

Charan, S.S and Pawar, K.D. and Gavhale , S.D. and Tikhe , C.V. and Charan , N.S. and Angel , B. and Joshi , V. and Patole, M.S. and Shouche , Y.S. (2016) Comparative analysis of midgut bacterial communities in three aedine mosquito species from dengue-endemic and non-endemic areas of Rajasthan, India. Med Vet Entomol. , 30 (3). pp. 264-277.

Charan , S.S. and Pawar , K.D. and Severson , D.W. and Patole , M.S. and Shouche , Y.S. (2013) Comparative analysis of midgut bacterial communities of Aedes aegypti mosquito strains varying in vector competence to dengue virus. Parasitol Res. , 112 (7). pp. 2627-2637.

Chatterjee , B. and Banoth , B. and Mukherjee , T. and Taye , N. and Vijayaragavan , B. and Chattopadhyay , S. and Gomes , J. and Basak , S. (2016) Late-phase synthesis of IκBα insulates the TLR4-activated canonical NF-κB pathway from noncanonical NF-κB signaling in macrophages. Sci. Signal. , 9 (457). ra120.

Chaudhari , A.U. and Paul , D. and Dhotre , D. and Kodam , K.M. (2017) Effective biotransformation and detoxification of anthraquinone dye reactive blue 4 by using aerobic bacterial granules. Water Research, 122. pp. 603-613333.

Chaudhari , DS and Dhotre , DP and Agarwal, DM and Gaike, AH and Bhalerao , D and Jadhav, P and Mongad, D and Lubree, H and Sinkar, VP and Patil , UK and Salvi , S and Bavdekar, A and Juvekar, SK and Shouche, YS (2020) Gut, oral and skin microbiome of Indian patrilineal families reveal perceptibleassociation with age. Scientific Report. , 10 (1). 5685. .

Chaudhuri,, S.R. and Mishra,, M. and De, S. and SamaL, B. and Saha, A. and Banerjee, S. and Chakraborty,, A. and Chakraborty, A. and Pardhiya, S. and Gola,, D. and Chakraborty, J. and Ghosh,, S. and Jangid,, K. and Mukherjee, L. and Sudarshan, M. and Nath, R. and Thakur, A.R. (2017) Microbe-based strategy for plant nutrient management. In: Biological Wastewater Treatment and Resource Recovery. Microbe-Based Strategy for Plant Nutrient Management . IntechOpen., pp. 1-55.

Chaudhuri,, S.R. and Sharmin, J. and Banerjee, S. and Jayakrishnan, U. and Saha, , A. and Mishra, M. and Ghosh, M. and Mukherjee, I. and Banerjee, A. and Jangid, K. and Sudarshan, M. and Chakraborty, A. and Nath, R and Banerjee, M. and Singh, S.S. and Saha, A.K. and Thakur , A.R (2016) Novel Microbial System Developed from Low-Level Radioactive Waste Treatment Plant for Environmental Sustenance. In: Environmental Sciences » "Management of Hazardous Wastes",. INTECH OPEN ACCESS PUBLISHER. ISBN ISBN 978-953-51

Choudhury, S.R. and More , T.H. and Chattopadhyay, R. and Lodh, I. and Ray, C.D. and Bose, G. and Sarkar, H.S. and Chakravarthy , B. and Rapole, S. and Chaudhury K., K. (2017) Polycystic ovary syndrome in Indian women: a mass spectrometry based serum metabolomics approach. Metabolomics, 13 (115).


Dar, MA and Pawar, KD and Rajput, BP and Rahi, P and Pandit, RS (2019) Purification of a cellulase from cellulolytic gut bacterium, Bacillus tequilensis G9 and its evaluation for valorization of agro-wastes into added value byproducts. Biocatalysis and Agricultural Biotechnology (20). p. 101219.

Dastager, S.G. and Mawlankar, R. and Krishnamurthi , S. and Ramana, V.V. and Tang, S.K. and Joseph , N. and Shouche, Y.S. (2014) Rhodococcus enclensis sp. nov., a novel member of the genus Rhodococcus. 2014 Aug;64(Pt 8):2693-9. , 64 (8). pp. 2693-2696.

Dastager, S.G. and Mawlankar, R. and Srinivasan, K. and Tang, S.K. and Lee , J.C. and Ramana, V.V. and Shouche, Y.S. (2014) Fictibacillus enclensis sp. nov., isolated from marine sediment. Antonie van Leeuwenhoek, 3. pp. 461-469.

Dastager , S.G. and Mawlankar, R. and Mual , P. and Verma, A. and Krishnamurthi , S. and Joseph , N. and Shouche, Y.S. (2015) Bacillus encimensis sp. nov. isolated from marine sediment. Int J Syst Evol Microbiol. , 65 (5). pp. 1421-1425.

Dastager , S.G. and Mawlankar , R. and Tang , S.K. and Srinivasan , K. and Ramana , V.V. and Shouche, Y.S. (2014) Bacillus enclensis sp. nov., isolated from sediment sample. Antonie van Leeuwenhoek, 105. pp. 199-206.

Deonalli, D. and Sharma, R. and Jangid, K. (2017) Microbial community dynamics during soil ecosystem development. In: Mining of Microbial Wealth and MetaGenomics;. Springer, pp. 57-82.


Gaike , AH and Paul , D and Bhute, S and Dhotre, DP and Pande, P and Upadhyaya, S and Reddy, Y and Sampath, R and Ghosh, D and Chandraprabha, D and Acharya, J and Banerjee, G and Sinkar, VP and Ghaskadbi, SS and Shouche, YS (2020) The Gut Microbial Diversity of Newly Diagnosed Diabetics but Not ofPrediabetics Is Significantly Different from That of Healthy Nondiabetics. mSystems, 5 (2). e00578-19.

Gaikwad, S. and Warudkar , A. and Shouche , Y. (2017) Efficacy of DNA barcoding for the species identification of spiders from Western. Mitochondrial DNA A 28(5):638-644., 28 (5). pp. 638-644.

Gaikwad , S.S. and Shouche , Y.S. and Gade, W.N. (2017) Deep Sequencing Reveals Highly Variable Gut Microbial Composition of Invasive Fish Mossambicus Tilapia (Oreochromis mossambicus) Collected from Two Different Habitats. Indian Journal of Microbiology, 57 (2). pp. 235-240.

Gaikwad S, S. and Shouche YS, Y.S. and Gade WN, W.N. (2016) Microbial community structure of two freshwater sponges using Illumina MiSeq sequencing revealed high microbial diversity. AMB Express. , 6 (40).

Ganji , R. and Dhali , S. and Rizvi , A. and Rapole , S. and Banerjee, S. (2016) Understanding HIV-Mycobacteria synergism through comparative proteomics of intra-phagosomal mycobacteria during mono- and HIV co-infection. Scientific Report. 22060 .

Ghattargi, V.C. and Kalam, S.H. and Pandit, S.S and Pawar, S.P. and Shouche , Y.S. (2018) Survey of probiotic preparations and labeling practices in Indian market. Indian Journal of Medical Research , 36 (1). pp. 116-118.

Ghattargi , VC and Garg , M and Raina, S and Silva, JD and Pawar, SP and Rahi, P (2019) Assessment of airborne microbial community in Indian cities during the Middle East dust storm. Current Science. , 117 (10). pp. 1693-700.

Ghattargi, , VC and Sape, K and Kumbhare, SV and Shouche, YS (2019) Mining Human Microbiome for Therapeutics. In: Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications. Springer, pp. 573-613.

Ghosh, D.K. and Bhose, S. and Sharma, P. and Warghane, A. and Motghare, M. and Ladaniya, M.S. and Reddy M.K, M.K. and Thorat , Y. and Yadav, A. (2017) First Report of a 16SrXIV Group Phytoplasma Associated With Witches’-Broom Disease of Acid Lime (Citrus aurantifolia) in India. Plant Dieases, 101 (5). p. 831.

Ghosh, M. and Saha, A. and Jangid, K. and Joshi, A. and Chaudhuri, S.R. (2017) A polyphasic approach of species identification for genus Bacillus. In Chaudhuri, S.R. (ed), Life Science: Recent Innovations & Research. I. In: Life Science: Recent Innovations & Research. International Research Publication House, India. , India.

Gokhale , K. and Patil , D.P. and Dhotre , D.P. and Dixit , R. and Mendki , M.J. and Patole , M.S. and Shouche , Y.S. (2013) Transcriptome analysis of Anopheles stephensi embryo using expressed sequence tags. Journal of Bioscience, 38 (2). pp. 301-309.

Gopal, M. and Bhute , S.S. and Gupta , A. and Prabhu , S.R. and Thomas , G.V. and Whitman, W.B. and Jangid, K. (2017) Changes in structure and function of bacterial communities during coconut leaf vermicomposting. Antonie van Leeuwenhoek. pp. 1-17.

Gujarati , S and Chaudhari, D and Hagir , A and Khairnar, M and Shouche , Y and Rahi, P (2020) Klebsiellaindica sp. nov., isolated from the surface of a tomato. International Journal of Systematic and Evolutionary Microbiology , 70 (5). pp. 3278-3286. ISSN 2020 May;70(5):3278-3286.


Hasan , S.S. and Singh , S. and Parikh , R.Y. and HDharne, M.S. and Patole , M.S. and Prasad , B.L. and Prasad , B.L. (2008) Bacterial synthesis of copper/copper oxide nanoparticles. J Nanosci Nanotechnol. 2008 Jun;8(6):3191-6, 8 (6). pp. 3191-3196.

Hussain , A and Dar , MS and Bano, N and Hossain, MM and Basit, R and Bhat, AQ and Aga, MA and Ali, S and Hassan , QP and Dar, MJ (2019) Identification of dinactin, a macrolide antibiotic, as a natural product-based small molecule targeting Wnt/β-catenin signaling pathway in cancer cells. Cancer Chemotherapy and Pharmacology , 84 (3). pp. 551-559.


Imran, M. and Saida, B. and Ghadi, S.C. and Verma, P. and Shouche, Y.S. (2016) The gut-associated Klebsiella sp. of the apple snail produces multiple polysaccharide degrading enzymes. Current Science, 110 (11). pp. 2170-2172.

Inamdar , A and Adhapure , NN and Sharma , R and Sonawane , MS (2019) Aureobasidium tremulum sp. nov. -Fungal Planet 907. Persoonia-Fungal Planet Description Sheets , 42. pp. 330-331.


Jamdhade, M.D. and Pawar, H. and Chavan, S. and Sathe, S. and Umasankar, P.K. and Mahale, K.N. and Dixit , T. and Madugundu, A.K. and Prasad, T.S. and Gowda, H. and Pandey , A. and Patole, M.S. (2015) Comprehensive proteomics analysis of glycosomes from Leishmania donovani. OMICS: A Journal of Integrative Biology, 19 (3). pp. 157-170. ISSN March 2015, 19(3): 157-170

Jangid , K. and Kao, M.H. and Lahamge, A. and Williams, M.A. and Rathbun, S.L. and Whitman, W.B. (2016) K-shuff: A Novel Algorithm for Characterizing Structural and Compositional Diversity in Gene Libraries. PLoS One. , 11 (12). e0167634..

Jani, K. and Dhotre , D. and Bandal , J. and Shouche, Y. and Suryavanshi, M. and Rale , V and Sharma , A. (2018) World's Largest Mass Bathing Event Influences the Bacterial Communities of Godavari, a Holy River of India. Microbial Ecology , 75 (3). pp. 706-718.

Jani , K. and Ghattargi , V. and Pawar , M. and Inamdar , M. and Shouche , A. and Sharma , A. (2017) Anthropogenic Activities Induce Depletion in Microbial Communities at Urban Sites of the River Ganges. Curr Microbiol. . pp. 1352-1355. ISSN 2017 Sep 7. doi: 10.1007/s00284-017-1352-5.

Jani , K. and Khare , K. and Senik , S. and Karodi , P. and Vemuluri , V.R. and Bandal , J. and Shouche , Y. and Rale , V. and Sharma , A. (2017) Corynebacterium godavarianum sp. nov., isolated from the Godavari river, India. Int J Syst Evol Microbiol. .

Jani , K. and Sharma , A. and Rale , V. and Shouche , Y. (2017) Impact of Microbiome Studies on Human Healthcare.  Indian Journal of Public Health Research and Development, 8 (4). 1009 .

Jena, J and Narwade, N and Das, T and Dhotre, D and Sarkar, U and Shouche, Y (2020) Treatment of industrial effluents and assessment of their impact on the structure and function of microbial diversity in a unique Anoxic-Aerobic sequential batch reactor (AnASBR). Journal of Environmental Management, 261. p. 110241.

Johnning , A. and Moore , E.R. and Svensson-Stadler , L. and Shouche , Y.S. and Larsson , D.G. and Kristiansson , E. (2013) Acquired Genetic Mechanisms of a Multiresistant Bacterium Isolated from a Treatment Plant Receiving Wastewater from Antibiotic Production. Applied and Environmental Microbiology , 79 (23). p. 7256.

Joshi, A. and Thite , S. and Kulkarni, G. and Dhotre, D. and Joseph, N. and Venkata Ramana, V. and Polkade , A. and Shouche, Y. (2016) Nitrincola alkalisediminis sp. nov., an alkaliphilic bacterium isolated from an alkaline lake. March 2016 66: 1254-1259, doi: 10.1099/ijsem.0.000868 , 66. pp. 1254-1259.


Kabirnataj , S and Nematzadeh , GA and Talebi, AF and Saraf , A and Suradkar , A and Tabatabaei, M and Singh, P (2020) Description of novel species of Aliinostoc, Desikacharya and Desmonostocusing a polyphasic approach. International Journal of Systematic and Evolutionary Microbiology , 70 (5). pp. 3413-3426.

Karmodiya , K. and Saurabh , J. and Pradhan , J.S. and Joshi , B. and Jangid , R. and Reddy , P.C. and Galande , S. (2015) A comprehensive epigenome map of Plasmodium falciparum reveals unique mechanisms of transcriptional regulation and identifies H3K36me2 as a global mark of gene suppression. Epigenetics Chromatin. , 8 (32).

Kirdat , K and Sundararaj, R and Mondal, S and Reddy, MK and Thorat, V and Yadav A., A (2019) Novel aster yellows phytoplasma subgroup associated with sandalwood spike disease in Kerala, India. Phytopathogenic Mollicutes, 9 (1). pp. 33-34.

Kirdat , K and Thorat , V and Yadav , A (2019) A new elm yellows phytoplasma strain associated with leaf yellowing disease of Tamarindus indica in India. Phytopathogenic Mollicutes. , 9 (1). pp. 11-12.

Kolekar , Y.M. and Pawar , S.P. and Zheng , L. and Adav , S.S. and Li W, and Shouche , Y.S. and Dastager , S.G. and Kodam , K.M. (2013) Alishewanella solinquinati sp. nov., Isolated from Soil Contaminated with Textile Dyes. Current Microbiology, 67 (4). pp. 454-459. ISSN October 2013, Volume 67, Issue 4, pp 454-459

Kulkarni , G. and Dhotre , D. and Dharne, M. and Misra , V. and Chowdhury , S. and Misra, S. and Patole, M. and Shouche , Y. (2013) Draft genome of Ochrobactrum intermedium strain M86 isolated from non-ulcer dyspeptic individual from India. Gut Pathogene, 5 (7). pp. 1-7.

Kulkarni , G. and Gohil, K. and Misra, V. and Kakrani, A.L. and Misra, S.P. and Patole, M. and Shouche , Y. and Dharne, M. (2016) Multilocus sequence typing of Ochrobactrum spp. isolated from gastricniche. J Infect Public Health. , S1876- (0341(1). pp. 30031-30034.

Kulkarni , G. and Gohil , K. and Misra , V. and Kakrani , A.L. and Misra , S.P. and Patole, M. and Shouche , Y. and Dharne , M. (2017) Multilocus sequence typing of Ochrobactrum spp. isolated from gastric niche. Journal of Infection and Public Health, 10 (2). pp. 201-210.

Kulkarni , G.J. and Shetty, S. and Dharne , M.S. and Shouche , Y.S. (2015) Genome sequencing analysisreveals virulence-related gene content of Ochrobactrum intermedium strain 229E, aurease-positive strain isolated from the human gastric niche. FEMS Microbiology Letters . , 359 (1). pp. 12-15. ISSN 2014 Oct;359(1):12-5.

Kumar, S and Suyal, DC and Yadav, A and Shouche, Y and Goel , R (2020) Psychrophilic Pseudomonas helmanticensis proteome under simulated cold stress. Cell Stress Chaperones., 25 (1025). p. 2025.

Kumar , H. and Pandey , P.K. and Doiphode , V.V. and Vir S.; , S. and Bhutani , K.K. and Patole , M.S. and Shouche , Y.S. (2013) Microbial Community Structure at Different Fermentation Stages of Kutajarista, a Herbal Formulation. Indian J Microbiol , 53 (1). pp. 11-17.

Kumar , S and Paul , D and Shouche, Y and Suryavanshi , M (2020) Data on genome sequencing, assembly, annotation and genomic analysis of Rhodococcus rhodochrous strain SPC17 isolated from Lonar Lake. Data in Brief, 29. p. 105336.

Kumari , R. and Chouhan , S. and Singh , S. and Chhipa , R.R and Ajay , A.K. and Bhat , M.K (2017) Constitutively activated ERK sensitizes cancer cells to doxorubicin: Involvement of p53-EGFR-ERK pathway. Journal of Bioscience, 42 (1). pp. 31-41. ISSN 42(1):31-41.

Kumbhare , S.V. and Dhotre , D.P. and Dhar , S.K. and Jani, K. and Apte , D.A. and Shouche, Y.S. and Sharma, A. (2015) Insights into diversity and imputed metabolic potential of bacterial communities in the continental. PLoS One (DOI:10). pp. 1-15. ISSN PLOS ONE | DOI:10.1371/journal.pone.0129864 June 11, 2015 1 / 14

Kumbhare , S.V. and Kumar , H. and Chowdhury , S.P. and Dhotre , D.P. and Endo , A. and Mättö , J. and Ouwehand , A.C. and Rautava , S. and Joshi , R. and Patil NP, N.P. and Patil , R.H. and Isolauri , E. and Bavdekar , A.R. and Salminen , S. and Shouche , Y.S. (2017) A cross-sectional comparative study of gut bacterial community ofIndian and Finnish children. Sci Rep. , 7 (1). p. 10555.

Kurli , R. and Chaudhari, D. and Pansare , A.N. and Khairnar, M. and Shouche, Y.S. and Rahi , P. (2018) Cultivable Microbial Diversity Associated With Cellular Phones. Front Microbiol. , 7 (9). p. 1229.


Lavecchia, , A. and Curci, M. and Jangid, K. and Whitman, W.B. and Ricciuti, P. and Pascazio, S. and Crecchio, C. (2015) Microbial 16S gene-based composition of a sorghum cropped rhizosphere soil under different fertilization managements. Biology and Fertility of Soils, 51 (6). pp. 661-672.


Madhupriya, G.S. and Thorat, V. and Yadav , A. and Rao , G.P. (2017) Identification and Characterization of 16SrIX and 16SrXI groups of phytoplasmas associated with leaf yellows and declining disease of garlic and onion in India. Indian Phytopathology , 70 (3). pp. 368-372.

Mahale, K.N. and Patole, M.S. (2015) The crux and crust of ebolavirus: Analysis of genome sequences and glycoprotein gene. Biochemical and Biophysical Research Communications, 463 (4). pp. 756-761.

Mahale , K.N. and Paranjape, P.S. and Marathe , N.P. and Dhotre, D.P. and Chowdhury, S. and Shetty, S.A. and Sharma, K. and Tuteja, U. and Sharma , A. and Batra , H.V. and Shouche , Y.S. (2014) Draft Genome Sequences of Yersiniapestis Strains from the 1994 Plague Epidemic of Surat and 2002 Shimla Outbreak in India. Indian Journal of Microbiology, 54 (4). pp. 480-482.

Marathe, N.P. and Gaikwad, S.S. and Vaishampayan , A.A. and Rasane, M.H. and Shouche, Y.S. and Gade, W.N. (2016) Mossambicus tilapia (Oreochromis mossambicus) collected from water bodies impacted by urban waste carries extended-spectrum beta-lactamases and integron-bearing gut bacteria. Journal of Bioscience, 41 (3). pp. 341-346.

Marathe , N and Shetty , S and Lanjekar , V and Ranade , D and Shouche , Y.S. (2012) Changes in human gut flora with age: an Indian familial study. BMC Microbiology , 12. pp. 222-232.

Marathe , N.P. and Regina , V.P. and Walujkar , S.A. and Charan , S.S. and Moore , E.R. and Larsson , D.G. and Shouche , Y.S. (2013) A Treatment Plant Receiving Waste Water from Multiple Bulk Drug Manufacturers Is a Reservoir for Highly Multi-Drug Resistant Integron-Bearing Bacteria (Open Access Journal). PLoS One, 8 (10). e77310-e77310.

Marathe , N.P. and Rasane, M.H. and Kumar, H. and Patwardhan , A.A. and Shouche , Y.S. and Diwanay , S.S. (2013) In vitro antibacterial activity of Tabernaemontana alternifolia (Roxb) stem bark aqueous extracts against clinical isolates of methicillin resistant Staphylococcus aureus. Annals of Clinical Microbiology and Antimicrobials , 26 (12). pp. 1-12.

Marathe , N.P. and Shetty , S.A. and Lanjekar , V.B. and Rasane , M.H. and Ranade , D.R. and Shouche , Y.S. (2014) Genome sequencing of multidrug resistant novel Clostridium sp. BL8 reveals its potential for pathogenicity. Gut Pathogens , 6 (30). pp. 1-5.

Marathe , N.P. and Shetty , S.A. and Shouche, Y.S. and Larsson, D.G. (2016) Limited Bacterial Diversity within a Treatment Plant Receiving Antibiotic-Containing Waste from Bulk Drug Production. PLoS One. , 11 (11). e0165914-e0165914.

Mishra , D and Suradkar, A and Saraf , A and Singh , P (2019) Phylogenetic evaluation of the true branched heterocytous cyanobacteria and description of soil dwelling Westiellopsis akinetica sp. nov. FEMS Microbiology Letters, 67 (5). p. 46. ISSN 67, Issue 5,

Mishra , S and Mitra , S and Radhika , NS and Yadav , A and Rao , GP (2019) Multilocus gene-specific characterization of ‘Candidatus Phytoplasma australasia’associated with shoot proliferation disease of small cardamom in India. 3 Biotech. Oct. , 9 (11). p. 420.

Mitra, S and Debnath, P and Bahadur, A and Chandra Das, S and Yadav, A and Rao GP. , GP (2019) First Report on ‘Candidatus Phytoplasma asteris’(16SrI-B subgroup) Strain Associated with Pineapple Shoot Proliferation and Witches’ Broom Symptoms in Tripura, India. Plant Diseases. Sept 2019;103(11):2941., 103 (11). p. 2941.

Mitra , S and Debnath, P and Bahadur, A and Das , SC and Kirdat, K and Yadav, A and Rao , G (2019) First Report of an Association of ‘Candidatus Phytoplasma australasia’ with Cashew nut Inflorescence Decline (CaID) Disease in Tripura, a North-Eastern State of India. Plant Diseases. , 101 (3). 970-970.

Mugade , M. and Patole , M. and Pokharkar , V. (2017) Bioengineered mannan sulphate capped silver nanoparticles for accelerated and targeted wound healing: Physicochemical and biological investigations. Biomedicine & Pharmacotherapy, 91. pp. 95-110. ISSN Volume 91, July 2017, Pages 95-110


Nair, N.V. and Joseph, N. and Krishna, K. and Sneha, K.G. and Tom, N. and Jangid, K. and Nair S. , A. (2015) A comparative study of coastal and clinical isolates of Pseudomonas aeruginosa. Braz. Braz J Microbiol. , 46 (3). pp. 725-734.

Nandre VS, V.S. and Bachate SP, S.P. and Salunkhe RC, R.C. and Bagade AV, A.V. and Shouche YS, Y.S. and Kodam KM. , K.M. (2017) Enhanced Detoxification of Arsenic Under Carbon Starvation: A New Insight into Microbial Arsenic Physiology. Current Microbiology, 74 (5). pp. 614-622.

Narayana, S. and Mohanraju,, R. and Singh, , P. and Thamke,, V. and Tapase,, S. and Shouche, Y.S. and Kodam, K. (2017) New record of a bloom forming, genotoxic strain Nodularia strain (KT447209) from Andaman and Nicobar Islands, India. Chemosphere, 174. pp. 315-320.


Pandey P.K, P.K and Verma P, P and Kumar H, H and Bavdekar A, A and Patole , M.S. and Shouche , Y.S. (2012) Comparative analysis of fecal microflora of healthy full-term Indian infants born with different methods of delivery (vaginal vs cesarean): Acinetobacter sp. prevalence in vaginally born i. Journal of Bioscience, 37 (6). pp. 989-998.

Paramasiva, I. and Shouche, Y.S. and Kulkarni, G.J. and Krishnayya, P.V. and Akbar , S.M. and Sharma , H.S. (2014) Diversity in gut microflora of Helicoverpa armigera populations from different regions in relation to biological activity of Bacillus thuringiensis δ-endotoxin Cry1Ac. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY, 87 (4). pp. 201-2013. ISSN 87(4):201-13

Parhi, P and Mulik, A and Jadhav , V and Yadav, A and Shouche Y, Y and Bhadekar, R (2019) Production and characterization of biosurfactant from Halomonas sp. BRI3. Indian J Biochem Biophys. , 56 (5). pp. 384-391.

Patel , V. and Munot, H. and Shah, V. and Shouche, Y.S. and Madamwar, D. (2015) Taxonomic profiling of bacterial community structure from coastal sediment of Alang-Sosiya shipbreaking yard near Bhavnagar, India. Marine Pollution Bulletin, 101 (2). pp. 736-745.

Patil , DP and Dhotre , DP and Chavan , SG and Sultan , A and Jain , DS and Lanjekar , VB and Schouche, Y.S. and Patole , M.S. (2012) Molecular analysis of gut microbiota in obesity among Indian individuals. Journal of Bioscience, 37 (4). pp. 647-657.

Patil , V.S. and Salunkhe, R.C. and Patil, R.H. and Husseneder, C. and Shouche , Y.S. and Venkata Ramana , V. (2015) Enterobacillus tribolii gen. nov., sp. nov., a novel member of the family Enterobacteriaceae, isolated from the gut of a red flour beetle,. Antonie Van Leeuwenhoek., 107 (5). 1207-1216..

Paul, D. and Kumbhare , S.Y. and Mhatre S.S. , S.S and Chowdhary S.P., S.P. and Shetta , S.A. and Marathe N.P., N.P and Bhute , S. and Shouche , Y.S. (2016) Exploration of Microbial Diversity and Community Structure of Lonar Lake: The Only Hypersaline Meteorite Crater Lake within Basalt Rock. Frontier in Microbiology .

Pawar, H and Sathe, G and Patole , MS (2020) Genome-Wide Proteomics and Phosphoproteomics Analysis of Leishmania spp. During Differentiation. In: Trypanosomatids. Methods in Molecular Biology . Springer, pp. 161-176.

Pawar , K.D and Banskar , S. and Rane , S.D and Charan , S.S and Kulkarni , G.J and Sawant , S.S and Patole , M.S. and Shouche , Y.S. (2012) Bacterial diversity in different regions of gastrointestinal tract of Giant African Snail (Achatina fulica). Microbiology Open. pp. 415-426.

Pawar , H. and Chavan, S. and Mahale, K. and Khobragade , S. and Kulkarni, A. and Patil, A. and Chaphekar, D. (2015) A proteomic map of the unsequenced kala-azar vector Phlebotomus papatasi using cell line. Acta Tropica, 152. pp. 80-89. ISSN Volume 152, December 2015, Pages 80–89

Pawar , H. and Kulkarni, A. and Dixit , T. and Chaphekar , D. and Patole, M.S. (2014) A bioinformatics approach to reanalyze the genome annotation of kinetoplastid protozoan parasite Leishmania donovani. Genomics, 104 (6). pp. 554-561. ISSN Volume 104, Issue 6, Part B, December 2014, Pages 554–561

Pawar , H. and Pai, K. and Patole , M.S. (2016) A novel protein coding potential of long intergenicnon-coding RNAs (lincRNAs) in the kinetoplastid protozoan parasite Leishmaniamajor. Acta Trop. , 167. pp. 21-25.

Pawar , H. and Renuse, S. and Khobragada, S.N. and Chavan, S. and Sathe, G. and Kumar , P. and Mahale , K.N. and Gore, K. and Kulkarni , A. and Dixit , T. (2014) Neglected tropical diseases and omics science: proteogenomics analysis of the promastigote stage of Leishmania major. OMICS: A Journal of Integrative Biology, 18 (8). pp. 499-512. ISSN 18(8):499-512

Polkade, A.V. and Mantri , S.S. and Patwekar , U.J. and Jangid K. , K. (2016) Quorum Sensing: An Under-Explored Phenomenon in the Phylum Actinobacteria. Frontiers in Microbilogy : Extreme Microbiology .

Polkade, A.V. and Ramana, V.V. and Joshi , A. and Pardesi, L. and Shouche, Y.S. (2015) Rufibacter immobilis sp. nov., isolated from a high-altitude saline. Int J Syst Evol Microbiol, 65 (5). pp. 1592-1597.

Pote , S.T. and Chakraborty , A. and Lahiri , K.K. and Patole, M.S. and Deshmukh , R.A. and Shah, S.R. (2017) Keratitis by a rare pathogen Colletotrichum gloeosporioides: A case report. Journal of Medical Mycology.

Pote , ST and Sonawane , MS and Rahi, P and Shah, SR and Shouche, YS and Patole, MS and Thakar , MR and Sharma, R (2020) Distribution of Pathogenic Yeasts in Different Clinical Samples: Their Identification, Antifungal Susceptibility Pattern, and Cell Invasion Assays. Infection and Drug Resistance, 2020 (13). pp. 1133-1145.

Prakash, O and Mahabare, K and Yadav,, K.K. and Sharma, R. (2019) Fungi from Extreme Environments: A Potential Source of Laccases Group of Extremozymes In Fungi in Extreme Environments. In: Fungi in Extreme Environments: Ecological Role and Biotechnological Significance pp 441-46. Springer, 441-462 -441-462 .

Prakash, O and Nimonkar, Y and Desai, D (2020) A Recent Overview of Microbes and Microbiome Preservation. Indian Journal of Microbiology. , 60 (3). pp. 297-309.

Prakash, O. and Nimonkar , Y. and Munot, H. and Sharma, A. and Vemuluri , V.R. and Chavadar, M.S. and Shouche, Y.S. (2014) Description of Micrococcus aloeverae sp. nov., an endophytic actinobacterium isolated from Aloe vera. Int. J. Syst. Evol. Microbiol. , 64 (10). p. 3427.

Prakash, O. and Sharma, R. and Singh, P. and Yadav, A. Strategies for Taxonomical Characterisation of Agriculturally Important Microorganisms. In: » Microbial Inoculants in Sustainable Agricultural Productivity. Microbial Inoculants in Sustainable Agricultural Productivity . Springer, pp. 85-101.

Prakash , O and Nimonkar , Y and Shouche , Y.S. (2013) Practice and prospects of microbial preservation. FEMS Microbiol Lett , 339. pp. 1-9.

Prakash , O. and Muduli , S. and Kumar , R. and Nimonkar Y5, Shouche, Y. and Shouche, Y.S. (2017) Description of Auricoccucs indicus gen. nov., sp. nov., isolated from skin of human ear. International Journal of Systematic and Evolutionary Microbiology.

Prakash , O. and Munot , H. and Nimonkar, Y. and Sharma, M. and Kumbhare, S. and Shouche , Y.S. (2014) Description of Pelistega indica sp. nov., isolated from human gut. International Journal of Systematic and Evolutionary Microbiology, 64. pp. 1389-1394.

Prakash , O. and Nimonkar , Y. and Chavadar , M.S. and Bharti , N. and Pawar , S. and Sharma , A. and Shouche , Y.S. (2017) Optimization of Nutrients and Culture Conditions for Alkaline Protease Production Using Two Endophytic Micrococci: Micrococcus aloeverae and Micrococcus yunnanensis. Indian J Microbiol. , 57 (2). pp. 218-225.

Prakash , O. and Prakash , P.K. and Kulkarni, G.L. and Mahale , K.N. and Shouche , Y.S. (2014) Technicalities and Glitches of Terminal Restriction Fragment Length Polymorphism (T-RFLP). Indian Journal of Microbiology, 54 (3). pp. 255-261.

Prakash , O. and Shouche , Y.S. and Jangid , K and Kostka , J.E (2013) Microbial cultivation and the role of microbial resource centers in the omics era. Appl Microbiol Biotechnol , 97 (1). pp. 51-62.

Puri , A and Bajaj , A (2020) Complete genome sequence of Paracoccus sp. strain AK26: Insights into multipartite genome architecture andmethylotropy. Genomics. p. 2020.


Raghuwanshi , S. and Riedel, S. and Hein, C. and Agarwal, T. and Zaidi, M.G.H. and Yadav, A. and Shouche, Y.S. and Goel , R. (2016) Selection of Poly(R)-3-hydroxybutyric acid utilizing bacteria by enrichment, optimization and compatibility testing for consortia development. Chemistry and Ecology , 32 (6). 583-597 .

Rahi, P. (2017) Phytomicrobiome: A reservoir for sustainable agriculture. In: Mining of Microbial Wealth and MetaGenomics pp 117-132. Springer, pp. 117-132.

Rahi, P. and Vyas, P. Microorganisms associated with tea rhizosphere in the Indian Himalayan Region. ENVIS Centre on Himalayan Ecology. ENVIS Bulletin Himalayan Ecology, 23. pp. 48-54.

Rahi , P. and Prakash , O. and Shouche , Y.S. (2016) Matrix-Assisted Laser Desorption/ Ionization Time-of-Flight Mass-Spectrometry (MALDI-TOF MS) Based Microbial Identifications: Challenges and Scopes for Microbial Ecologists. Front Microbiol., 7. p. 1359.

Rahi , P. and Kurli , R. and Khairnar , M. and Jagtap , S. and Pansare , A.N. and Dastager , S.G. and Shouche , Y.S. (2017) Description of Lysinibacillus telephonicus sp. nov., isolated from the screen of a cellular phone. Int J Syst Evol Microbiol. (67). pp. 2289-2295. ISSN 67: 2289-2295

Rahman , A.A. and Krishnasastry, M.V. (2014) Hemolytic activity of mycobacterial TlyA (Rv1694) is independent of its rRNA methylation activity. CURRENT SCIENCE, 106 (5). pp. 775-729.

Ranjan, M. and Karade , S. and Rahi , P. and Singh , S.P and Sen , S. (2017) Urosepsis due to Multi Drug Resistant Myroidesodoratimimus: A Case Report. International Journal of Current Microbiology and Applied Sciences , 6 (8). pp. 1930-1935.

Ranjan , A.K and Joglekar , M.V. and Atre , A.N. and Patole , M. and Bhonde , R.R. and Hardikar , A.A. (2012) Cellular detection of multiple antigens at single cell resolution using antibodies generated from the same species. Journal of Immunological Methods, 379 . pp. 42-47.

Ranjan , A.K and Joglekar , M.V and Atre , A.N and Patole , M.S. and Bhonde , R.R. and Hardikar , A.A. (2012) Simultaneous imaging of microRNA or mRNA territories with protein territory in mammalian cells at single cell resolution. RNA Biology, 9 (7). pp. 949-953.

Rao , G. and Madhupriya , V.T. and Manimekalai, R. and Tiwari, A. and Yadav , A. (2017) A century progress of research on phytoplasma diseases in India. Phytopathogenic Mollicutes, 1 (1). p. 38.

Rao , G.P. and Prakasha, T.L. and Priya, M. and Thorat , V. and Kumar, M. and Baranwal , V.K. (2017) First report of 16SrII-D phytoplasmas associated with fodder crops in India. Phytopathogenic Mollicutes Vol. 7 (2), December 2017, 106-110, 7 (2). pp. 106-110.

Reddy , V.S. and Thirumala , M. and Farooq M2, Sasikala C3, , M. and Farooq M2, Sasikala C3, , C. and Venkata Ramana C4., C. (2016) Marinococcus salis sp., nov., a moderately halophilic bacterium isolated from a salt marsh. Arch Microbiol. 2016 Dec;198(10):1013-1018., 198 (10). pp. 1013-1018.

Regar, RK and Gaur, VK and Bajaj , A and Tambat, S and Manickam, N (2019) Comparative microbiome analysis of two different long-term pesticide contaminated soils revealed the anthropogenic influence on functional potential of microbial communities. Science of The Total Environment 2019 Sep:681:413-423., 681. pp. 413-423.

Rutgersson , C and Fick , J. and Marathe , N. and Kristiansson , E. and Janzon, A. and Angelin , M. and Johansson, A. and Shouche, Y. and Flach , C.F. and Larsson, D.G. (2014) Fluoroquinolones and qnr genes in sediment, water, soil, and human fecal flora in an environment polluted by manufacturing discharges. Environment Science Technology , 48 (14). pp. 7825-7832. ISSN 48(14):7825-32.


Sacheti , P. and Patil , R. and Dube, A. and Bhonsle , H. and Thombre, D. and Marathe, S. and Vidhate, R. and Wagh, P. and Kulkarni , M. and Rapole, R. and Gade, W. (2014) Proteomics of arsenic stress in the gram-positive organism Exiguobacterium sp. Applied Microbiology and Biotechnology, 98 (15). pp. 6761-6773.

Salunkhe, R.C. and Narkhede, K.P. and Shouche , Y.S. (2014) Distribution and evolutionary impact of wolbachia on butterfly hosts. Indian J Microbiol. , 54 (3). pp. 249-254.

Sanuth, H.A. and Yadav, A. and Fagade, O.E. and Shouche, Y.S. (2013) Utilization by Proteus sp. and Bordetella sp. Isolated From Solid Waste Dumpsites in Lagos State, Nigeria, First Report. Indian J Microbiol. , 53 (2). pp. 221-226.

Sapre, N and Chakraborty, R and Purohit, P and Bhat, S and Das, G and Bajpe, SR (2020) Enteric pH responsive cargo release from PDA and PEG coated mesoporous silica nanoparticles: a comparative study in Drosophila melanogaster. RSC Advances 10(20):11716-11726 ·, 10 (20). pp. 11716-11726.

Saraf , A and Dawda, HG and Suradkar , A and Agre, V and Singh, P (2020) Fortiea necridiiformans sp. nov., a soil-dwelling cyanobacterium from PachmarhiBiosphere Reserve, India. International Journal of Systematic and Evolutionary Microbiology.

Satoor, S.N. and Patil, D.P. and Kristensen, H.D. and Joglekar, M.V. and Shouche , Y.S. and Hardikar , A.A. (2014) Manipulation and assessment of gut microbiome for metabolic studies. In: Mouse Genetics : Protocol. Methods in Molecular Biology, 1194 (10). Springer, New York , pp. 449-469. ISBN 978-1-4939-1214-8

Sha , S.P. and Jani , K. and Sharma , A. and Sharma , A. and Anupma , A. and Pradhan , P. and Shouche , Y. (2017) Analysis of bacterial and fungal communities in Marcha and Thiat, traditionally preparedamylolytic starters of India. Sci Rep. , 7 (1). p. 10967.

Shah , S and Pant, P and Sharma, R and Shouche , YS and Sharma, J (2019) Coniochaeta dendrobiicola sp. nov. -Fungal Planet 917. Persoonia-Fungal Planet Description (42). pp. 350-351.

Shaligram, S. and Kumbhare, S.V. and Dhotre, D.P. and Muddeshwar , M.G. and Kapley, A. and Joseph, N. and Purohit , H.P. and Shouche, Y.S. and Pawar, S.P. (2016) Genomic and functional features of the biosurfactant producing Bacillus sp. AM13. Funct Integr Genomics, 16 (5). pp. 557-566. ISSN 2016 Sep;16(5):557-66

Shanmugam, S.G. and Magbanua, Z.V. and Williams, M.A. and Jangid, K. and Whitman , W.B. and Peterson, D.G. and Kingery , W.L. (2016) Bacterial diversity patterns differed in two developing ecosystems. Microbial Ecology . pp. 1-14.

Shanmugam , S.G. and Magbanua , Z.V. and Williams, M.A. and Jangid, K. and Whitman, W.B. and Peterson , D.G. and Kingery, W.L. (2017) Bacterial diversity patterns differ in soils developing in sub-tropical and cool-temperate ecosystems. Microb Ecol. , 73 (3). pp. 556-569.

Sharma, R. and Prakash, O. and Sonawane, M.S. and Nimonkar, Y. and Golellu, P.B. and Sharma, R. (2016) Diversity and Distribution of Phenol Oxidase Producing Fungi from Soda Lake and Description of Curvularia lonarensis sp. nov. Front. Microbiol..

Sharma, R. and Thakur, A. and Pawar P, P. and Nair K., K. (2017) Fungal Planet description sheets: 625-715. Persoonia-Molecular Phylogeny and Evolution of Fungi , 39. pp. 270-467.

Sharma , A. and Paul , D. and Dhotre , D. and Jani , K. and Pandey , A. and Shouche , Y.S. (2017) Deep sequencing analysis of bacterial community structure of Soldhar hot spring, India. Microbiology, 86 (1). pp. 136-142.

Sharma , A. and Dhar, S.K. and Prakash, O. and Vemuluri, V.R. and Thite , V. and Shouche , Y.S. (2014) Description of Domibacillus indicus sp. nov., isolated from ocean sediments and emended description of the genus Domibacillus. Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3010-5. doi: 10.1099/ijs.0.064295-0. Epub 2014 Jun 6, 64 (9). pp. 3010-3015.

Sharma , A. and Shouche, Y. (2014) Microbial Culture Collection (MCC) and International Depositary Authority (IDA) at National Centre for Cell Science,. Indian J. Microbiol. 2014 Jun;54(2):129-33. , 54 (2). pp. 129-133.

Sharma , R and Mosoh, D and Shouche , YS and Singh, SM and Naik , R (2019) Naganishia indica sp. nov. -Fungal Planet 933. Persoonia-Fungal Planet Description Sheets. Persoonia-Fungal Planet Description Sheets , 42. pp. 384-385.

Sharma , R. (2017) Ectomycorrhiza: Symbiotic fungal association with plant their diversity, ecology and practical applications. In: Mycorrhiza - Function, Diversity. In: Mycorrhiza - Function, Diversity, State of the Art pp 99-13. Springer, pp. 93-113.

Sharma , R. and Kulkarni , G. and Sonawane , M.S. and Shouche , Y.S. (2013) New record of Scedosporium dehoogii from India. Mycotaxon. , 124. pp. 239-245.

Sharma , R. and Jangid , K. (2016) Role of Quorum Sensing in Fungal Morphogenesis and Pathogenesis. In: Fungal Metabolites. Reference Series in Phytochemistry pp 1-28 (28). Springer International Publishing, pp. 1-28. ISBN 978-3-319-19456-1

Sharma , R. and Kulkarni , G. and Shouche , Y.S. (2013) Corynascus verrucosus, second record for science and new for India. Nova Hedwigia , 97 (3-4). pp. 485-494.

Sharma , R. and Kulkarni , G. and Shouche , Y.S. (2013) Pseudofusicoccum adansoniae isolated as an endophyte from Jatropha podagrica: new record for India. Mycotaxon, 123. pp. 39-45.

Sharma , R. and Kulkarni , G. and Sonawane , M.S. and Shouche , Y.S. (2014) A new endophytic species of Arthrinium (Apiosporaceae) from Jatropha podagrica. Mycoscience,. Journal Mycoscience , 55 (2). pp. 118-123.

Sharma , R. and Kulkarni , G. and Sonawane , M.S. and Shouche , Y.S. (2013) A new endophytic species of Chaetomium from Jatropha podagrica. Mycotaxon, 124 (1). pp. 117-126.

Shetty , S.A. and Marathe , N.P. and Munot , H. and Antony, C.P. and Dhotre, D.P. and Murrell , J.C. and Shouche, Y.S. (2013) Draft Genome Sequence of Methylophaga lonarensis MPLT, a Haloalkaliphilic (Non-Methane-Utilizing) Methylotroph. Genenome Annuance, 1 (3). e00202-e002013. ISSN May/June 2013 Volume 1 Issue 3 e00202-13

Shetty , S.A. and Marathe, N.P. and Lanjekar , V. and Ranade , D. and Shouche , Y.S. (2013) Comparative Genome Analysis of Megasphaera sp. Reveals Niche Specialization and Its Potential Role in the Human Gut. PLoS One, 8 (11). e79353-e79353.

Shetty , S.A. and Marathe, N.P. and Shouche , Y.S. (2013) Opportunities and challenges for gut microbiome studies in the Indian population. Microbiome , 1 (24).

Shouche, Y.S. and Mande , S.C. (2017) Indian Human Microbiome Initiative:Indian-Ness through the Magnifying Glass. Current Science, 112 (2). pp. 207-208.

Shouche , Y.S. and Pawar , S.P and Dhotre , D.P and Shetty , S.A and Chowdhury , S.P (2012) Genome Sequence of Janibacter hoylei MTCC8307, Isolated from the Stratospheric Air. Journal of Bacteriology , 194 (23). pp. 6629-6630.

Singh, P and Šnokhousová, J and Saraf, A and Suradkar, A and Elster, J (2020) Phylogenetic evaluationof the genus Nostoc and description of Nostoc neudorfense sp. nov., from theCzech Republic. International Journal of Systematic and Evolutionary Microbiology. , 70 (6). doi:10.1099.

Singh, SM and Sharma , R and Shouche , YS (2019) Leucosporidium himalayensis sp. nov. -Fungal Planet 927. Persoonia-Fungal Planet Description Sheets 2019 June; 42:372-373. Persoonia-Fungal Planet Description Sheets, 42. pp. 372-373.

Singh , P. and Anigo, M.R. and Kunui , K. and Shaikh , Z.M. and Suradkar , A. and Shouche , Y.S. and Mishra , A.K. and Singh , S.S. (2016) A new species of Scytonema isolated from Bilaspur, Chhattisgarh, India. Journal of Systematic Evolution.

Singh , P. and Muneef, S.Z. (2016) New species of Nostoc (cyanobacteria) isolated from Pune, India, using morphological, ecological and molecular attributes. Plant Systematics and Evolution, 302 (10). pp. 1381-1394.

Singh, , P. and Minz, R.A. and Kunui, K. and Shaikh, Z.M. and Suradkar, A. and Shouche, Y.S. and Singh, S.S. (2017) A new species of Scytonema isolated from Bilaspur, Chhattisgarh, India using the polyphasic approach. Plant Systematics and Evolution, 303 (2). pp. 249-259.

Singh, , P. and Minj, R.A. and Kunui, K. and Shaikh, Z.M. and Suradkar, A. and Shouche, Y.S. and Singh, S.S. (2016) A new species of Scytonema isolated from Bilaspur, Chhattisgarh, India. Journal of Systematics and Evolution, 54 (5). pp. 519-527.

Soltanighias, T and Singh, AEA and Satpute, SK and Banpurkar, AG and Koolivand A, A and Rahi, P (2019) Assessment of biosurfactant-producing bacteria from oil contaminated soils and their hydrocarbon degradation potential. Environmental Sustainability (2). 285–296-285–296.

Soltanighias , T. and Singh , A.E. and Rahi, P. (2017) Mining Bacterial Diversity for Biosurfactants. In: Mining of Microbial Wealth and MetaGenomics. Springer, pp. 443-461.

Sonalkar, V.V. and Mawlankar, R. and Venkata Ramana , V. and Joseph , N. and Shouche , Y.S. and Dastager, S.G. (2015) Bacillus filamentosus sp. nov., isolated from sediment sample. Antonie Van Leeuwenhoek. , 107 (2). pp. 433-441.

Soni , R. and Suyal , D.C. and Agrawal , K. and Yadav, Y. and Shouche , Y.S. and Goel , R. (2015) Differential proteomic expression of himalayan psychrotrophic diazotroph Pseudomonas palleroniana N26 under low temperature diazotrophic conditions. Cryo Letters. , 36 (2). pp. 74-82.

Suradkar A, , A. and Villanueva C, , C. and Gaysina LA, , L.A. and Casamatta DA,, D.A. and Saraf A, , A. and Dig, G. and Mergu R, , R. and Singh P. , P. (2017) Nostoc thermotolerans sp. nov., a soil dwelling species of Nostoc (Cyanobacteria) isolated from Madhya Pradesh, India. International Journal of Systematic and Evolutionary Microbiology .

Suresh , G and Tushar, DL and Indu , B and Sasikala, S and Ramana , CB Taxogenomics Resolves Conflict in the Genus Rhodobacter: A Two and Half Decades Pending Thought to Reclassify the Genus Rhodobacter. Frontiers in Microbiology. . 2480 .

Suryavanshi , M.V. and Bhute, S.S. and Jadhav, S.D. and Bhatia , M.S. and Gune, R.P. and Shouche , Y.S. (2016) Hyperoxaluria leads to dysbiosis and drives selective enrichment of oxalate metabolizing bacterial species in recurrent kidney stone endures. Scientific Report, 6. 34712 .

Suryavanshi , M.V. and Paul, D. and Doijad , S.P. and Bhute , S.S. and Hingamire , T.B. and Gune , R.P. and Shouche , Y.S. (2017) Draft genome sequence of Lactobacillus plantarum strains E2C2 and E2C5 isolated from human stool culture. Stand Genomic Sci. 2017; 12: 15., 12 (15).

Suyal, D and Kumar , S and Joshi , D and Yadav , A and Shouche Y, Y and Goel , R (2019) Comparative overview of red kidney bean (Phaseolus valgaris) rhizospheric bacterial diversity in perspective of altitudinal variations. Biologia (Bratisl), 74. 1405–1413.-1405–1413..

Suyal , D.C. and Yadav , A. and Shouche , Y.S. and Goel, R. (2014) Differential proteomics in response to low temperature diazotrophy of Himalayan psychrophilic nitrogen fixing. Current Microbiology, 68 (4). pp. 543-550.

Suyal , D.C. and Kumar , S. and Yadav , A. and Shouche , Y. and Goel , R. (2017) Cold Stress and Nitrogen Deficiency Affected Protein Expression of Psychrotrophic Dyadobacter psychrophilus B2 and Pseudomonas jessenii MP1. Frontier Microbiology.


Tembe , S. and Shouche , Y. and Ghate , H.V. (2014) DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India. Meta Gene. 2014 Oct 10;2:737-45., 10 (2). pp. 737-745.

Thombre , R.S. and Shinde , V.D. and Oke, R.S. and Dhar , S.K. and Shouche , Y.S. (2016) Biology and survival ofextremely halophilic archaeon Haloarcula marismortui RR12 isolated from Mumbaisalterns, India in response to salinity stress. Scientific Report, 6. p. 25642.

Thorat, M.N. and Mawlankar, R. and Sonalkar, V.V. and Venkata Ramana V, V. and Joseph , N. and Shouche , Y.S. and Dastager , S.G. (2015) Deinococcus enclensis sp. nov., isolated from a marine sediment sample. Antonie Van Leeuwenhoek. , 107 (1). pp. 141-148.

Thorat, V. and More, S.S. and Mane,, S. and Nandanwar, R.S. and Deshmukh, P.B. and Surayavanshi, M. and Shouche, Y.S. and Yadav, A. (2017) First Report of Association of Candidatus Phytoplasma cynodontis (16SrXI-B Group) With Streak, Yellowing, and Stunting Disease in Durum and Bread Wheat Genotypes From Central India. Plant Disease, 02-17- (PDIS-0).

Thorat, V. and More, V. and Jadhav, , P. and Mane, S.S. and Nandanwar, R.S. and Deshmukh, M. and Surayavanshi, Y. and Shouche, , Y.S. and Yadav, A. (2016) First Report of a 16SrII-D Group Phytoplasma Associated With Witches’-Broom Disease of Soybean (Glycine max) in Maharashtra, India. Plant Dieases, 100 (12). ISSN December 2016, Volume 100, Number 12

Tomer , S. and Suyal , D.C. and Shukla, A. and Rajwar , J. and Yadav, A. and Shouche , Y. and Goel , R. (2017) Isolation and characterization of phosphate solubilizing bacteria from Western Indian Himalayan soils. 3 Biotech (17). p. 7.

Tripathi, S. and Thorat, V. and Verma, Y. and Shouche , Y.S. and Yadav, A. (2017) First Report of ‘Candidatus Phytoplasma asteris’ (subgroup 16SrI-X) Associated with Bottle Gourd Virescence and Phyllody Disease in India. Plant Disease, 101 (11). p. 1949.


Van Bocxlaer , I. and Biju, S.D. and William , B and Giri, V.B. and Shouche , Y.S. and Bossuyt, F. (2012) Mountain-associated clade endemism in an ancient frog family (Nyctibatrachidae) on the Indian subcontinent. Molecular Phylogenetics and Evolution, 62. pp. 839-842.

Vashist , P and Nogi , Y and Ghadi , SC and Verma , P, and Shouche, Y.S. (2013) Microbulbifer mangrovi sp. nov., a polysaccharide-degrading bacterium isolated from an Indian mangrove. International Journal of Systematic and Evolutionary Microbiology , 63. pp. 2532-2537.

Verma , P and Seong , C.N and Pandey , P.K and Bhonde , R.R and Seong , C. and Rohde, M. and Shouche , Y.S. (2013) Bhargavaea indica sp. nov., a Member of the Phylum Firmicutes, Isolated from Arabian Sea Sediment§. Journal of Microbiology, 51 (1). pp. 36-42.

Vipool, , T. and Bhale, U. and Sawant, V. and More, V. and Jadhav , P. and Mane, S.S. and Nandanwar , R.S. and Tripathi, S. and Yadav, A. (2016) Alternative weed hosts harbors 16SrII group phytoplasmas associated with little leaf and witches’ broom diseases of various crops in India. Phytopathogenic Mollicutes, 6 (1). pp. 50-55.


Waghmode , S. and Dama , L. and Hingamire, T. and Bharti, N. and Doijad , S. and Suryavanshi , M. (2017) Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water. J Genomics. , 5. pp. 124-127.

Walujkar , S.A. and Dhotre1 , D.P. and Marathe , N.P. and Lawate , P.S. and Bharadwaj , R.S. and Shouche , Y.S. (2014) Characterization of bacterial community shift in human Ulcerative Colitis patients revealed by Illumina based 16S rRNA gene amplicon sequencing. Gut Pathogens, 6 (22). pp. 1-10.


Yadav, V. and Thorat, V. and Mahadevakumar, S. and Janardhana, G.R. and Yadav, A. (2016) First Report of the Association of the 16SrII-D Phytoplasma Subgroup with Little Leaf Disease of Crotalaria in Karnataka, India. Plant Disease, 100 (12). p. 2523.

Yadav , A. and Bhale , U. and Thorat, V. and Shouche , Y.S. (2014) First report of a new subgroup 16Sr II-M 'Candidatus Phytoplasma aurantifolia' associated with witches'-broom disease of Tephrosia purpurea in India. Plant Disease , 98 (7). p. 990.

Yadav , A. and Thorat , V. and Deokule , S. and Shouche , Y. and Prasad , D.T. (2017) New subgroup 16SrXI-F phytoplasma strain associated with sugarcane grassy shoot (SCGS) disease in India. Int J Syst Evol Microbiol. 2017 Feb;67(2):374-378, 67 (2). pp. 374-378.

Yadav , M.A. and Thorat , V. and Rao , G.P. (2017) Molecular detection of 16SrI-B and 16SrII-D subgroups of phytoplasma associated with flat stem and witches' broom disease of Celosia argentea L. 3 Biotech. 2017 Oct;7(5):311., 7 (5). p. 311.

This list was generated on Mon Mar 1 11:54:11 2021 IST.